PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT09804
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family MYB_related
Protein Properties Length: 259aa    MW: 28718.3 Da    PI: 5.8982
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT09804genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.12.4e-0933562347
                     -HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
                     +W++Ia++++ gRt++++k++w+ +
         EMT09804 33 RWSLIASHLP-GRTDNEIKNYWNAH 56
                     5*********.***********976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.679157IPR017877Myb-like domain
SuperFamilySSF466893.75E-82960IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.9E-133157IPR009057Homeodomain-like
CDDcd001671.48E-73257No hitNo description
PfamPF002492.5E-73357IPR001005SANT/Myb domain
PfamPF066403.3E-475114IPR010588Myb-related protein P, C-terminal
PfamPF066401.8E-21131259IPR010588Myb-related protein P, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MKNNMLVILL RLHIVQFKYL SLTSMHLLEL ADRWSLIASH LPGRTDNEIK NYWNAHLSRR  60
SHSFRHTHTA GKETTITIDI NKISATSKRR GGRAPRSSMK KQPVPEPTKS TESSSPVPAI  120
SSSTSSLPQG YSDKNQPINS IPNDMPCSDH VDLNGGVLKP NYAKDSMNQI GILEEESEIE  180
GLLSSMDDMP ASGLNGLQHG GHLPLVEDLL DMDWEGFATH LWDQPAQSDQ LQPAEPQATM  240
GSVSDELESF VHWLLSDTC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003558096.15e-78PREDICTED: myb-related protein P-like
TrEMBLM8BSM50.0M8BSM5_AEGTA; Myb-related protein P
STRINGBRADI1G64687.12e-77(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.19e-19myb domain protein 12